Publications


§-these authors contributed equally to this work

*-corresponding author(s)

32. S. Srivastava§, G. Sekar§, A. Ojoawo§, A. Aggarwal§, E. Ferreira, E. Uchikawa, M. Yang, C. R. Grace, R. Dey, Y. Lin, C. D. Guibao, S. Jayaraman, S. Mukherjee, A. A. Kossiakoff, B. Dong, A. Myasnikov, and T. Moldoveanu*, Structural basis of BAK sequestration by MCL-1 in apoptosis, Molecular Cell, 2025. [pdf] [SI]

31. L. Guo*, M. Yang, B. Dong, S. Lewman, A. V. Horn, and S. Jia*, Engineering central substitutions in heptamethine dyes for improved fluorophore performance, JACS Au, 4, pp. 3007-3017, 2024. [pdf] [SI]

30. J. E. Batey, G. W. Kim, M. Yang, D. C. Heffer, E. D. Pott, H. Giang, and B. Dong*, High throughput spectrally resolved super-resolution fluorescence microscopy with improved photon usage, Analyst, 149, pp. 2801-2805, 2024. [pdf] [SI]

29. M. Yang§, N. Mansour§, T.X. Huang, D. C. Heffer, Y. Pei, W. Huang, J. Li*, B. Dong*, and N. Fang*, Reaction initiated single molecule tracking of mass transfer in core-shell mesoporous silica particle, Analytical Chemistry, 96, pp. 2500-2505, 2024. [Front Cover] [pdf] [SI]

28. M. Yang, J. E. Batey, and B. Dong*, Automated five-dimensional single particle tracking by bifocal parallax dark-field microscopy with electronic tunable lens, Analytical Chemistry, 96, pp. 1-5, 2024. [pdf] [SI]

27. O. Y. Ibhagui, H. Han, G. Peng, D. Li, M. L. Meister, J. Qiao, M. Salarian, B. Dong, M. Sharma, Y. Yuan, S. Tan, Y. Xu, H. Yang, Z. Gui, G. Satyanarayana, S. Xue, R. Chakra, Y. Hai, Y. Meng, P. Z. Sun, K. Hekmatyar, G. Sica, X. Ji, Z. Liu, and J. J. Yang*, Early Detection and Staging of Lung Fibrosis enabled by collagen-targeted MRI Protein Contrast Agent, Chemical & Biomedical Imaging, 1, pp. 268-285, 2023. [pdf] [SI]

26. J. E. Batey, M. Yang, H. Giang, and B. Dong*, Ultrahigh-throughput single-particle hyperspectral imaging of gold nanoparticles, Analytical Chemistry, 95, pp. 5479–5483, 2023. [pdf] [SI] [Supplementary Cover]

25. M. A. Ghane, Z. Allen, C. L. Miller, B. Dong, N. Fang, J. Yang, and A. M. Mabb*, Arc ubiquitination regulates endoplasmic reticulum-mediated Ca2+ release and CaMKII signaling, Frontiers in Cellular Neuroscience, 17, pp. 1091324-1091339, 2023. [pdf] [SI]

24. T.X. Huang§, M. Yang§, H. Giang, B. Dong*, and N. Fang*, Resolving heterogeneous adsorption of antibody fragment on 2D layered molybdenum disulfide by super-resolution imaging, Langmuir, 38, pp. 7455-7461, 2022. [pdf] [SI]

23. A. George, B. Dong, H. Lail, M. Gomez, Y. Hoffiz, C. Ware, N. Fang, A. Murphy, E. Hrabovszky, D. Wanders, and A. Mabb*, The E3 ubiquitin ligase RNF216/TRIAD3 is a key coordinator of the hypothalamic-pituitary-gonadal axis, IScience, 25, pp. 104386-104414, 2022. [pdf] [SI]

22. S. Filbrun, F. Zhao, K. Chen, T. X. Huang, M. Yang, X. Cheng*, B. Dong*, and N. Fang*, Imaging dynamic processes in multiple dimensions and length scales, Annual Review of Physical Chemistry, 73, pp. 17.1–17.26, 2022. [pdf]

21. S. Filbrun, T.X. Huang, F. Zhao, K. Chen, B. Dong*, and N. Fang*, Combinatorial single particle spectro-microscopic analysis of plasmon coupling of gold nanorods on mirror, The Journal of Physical Chemistry C, 125, pp. 26627-26634, 2021. [pdf] [SI]

20. H. Yang§, S. Tan§, J. Qiao, Y. Xu, Z. Gui, Y. Meng, B. Dong, G. Peng, O. Y. Ibhagui, W. Qian, J. Lu, Z. Li, G. Wang, J. Lai, L. Yang, H. E. Grossniklaus* and J. J. Yang*, Non-invasive detection and complementary diagnostic of liver metastases via chemokine receptor 4 imaging, Cancer Gene Therapy, 29, pp. 1827–1839, 2022. [pdf]

19. R. Gorkhali, L. Tian, B. Dong, P. Bagchi, X. N. Deng, S. Pawar, D. Duong, N. Fang, N. Seyfried, and J. J. Yang*, Extracellular calcium rewires calcium-sensing receptor network integrating intracellular calcium-signaling and related key pathways, Scientific Reports, 11, pp. 20576-20592, 2021. [pdf]

18. X. N. Deng, X. Yao, K. Berglund, B. Dong, D. Ouedraogo, A. Ghane, Y. Zhuo, C. McBean, Z. Wei, S. Gozem, S. Yu, L. Wei, N. Fang, A. Mabb, G. Gadda, D. Hamelberg, and J. J. Yang*, Tuning protein dynamics to sense rapid calcium dynamics, Angewandte Chemie International Edition, 60, pp. 2-12, 2021. [pdf]

17. T.X. Huang§, B. Dong§, S. Filbrun, A. Okmi, X. Cheng, M. Yang, N. M. Mansour, S. Lei* and N. Fang*, Single-molecule photocatalytic dynamics at defects of layered two-dimensional InSe, Science Advances, 7, pp. 4452-4460, 2021. [pdf][SI]

16. X. Cheng§, K. Chen§, B. Dong§, M. Yang, S. Filbrun, Y. Myoung, T.X. Huang, Y. Gu, G. Wang* and N. Fang*, Dynamin-dependent vesicle twist at the final stage of clathrin-mediated endocytosis, Nature Cell Biology, 23, pp. 859-869, 2021. [pdf]

15. B. Dong*, N. M. Mansour, T.X. Huang, Wenyu Huang*, and N. Fang*, Single molecule fluorescence imaging of nanoconfinement in porous materials, Chemical Society Reviews, 50, pp. 6483-6506, 2021. [pdf]

14. F. N. Reddish§, C. L. Miller§, X. N. Deng§, B. Dong, A. Ghane, R. Gorkali, O. Y. Ibhagui, K. M. Solntsev, Y. Zhuo, G. Gadda, A. Mabb, N. Fang and J. J. Yang*, Rapid subcellular calcium responses and dynamics by calcium sensor G-CatchER+, IScience, 24, pp. 102129-102172, 2021. [pdf]

13. F. Zhao, S. Filbrun, T.X. Huang, B. Dong* and N. Fang*, Multiscale evolution of bulk heterojunction solar cell active layers under thermal stress, Analytical Chemistry,93, pp. 1232–1236, 2021. [pdf]

12. X. Cheng, K. Chen, B. Dong, S. Filbrun, G. Wang and N. Fang*, Resolving cargo-motor-track interactions in living cells with bifocal parallax single particle tracking, Biophysical Journal, 120, pp. 1-9, 2021. [pdf]

11. B. Dong§, N. M. Mansour§, Y. Pei§, Z. Wang, T.X. Huang, S. Filbrun, M. Chen, X. Cheng, M. Pruski, W. Huang* and N. Fang*, Single molecule investigation of nanoconfinement hydrophobicity in heterogeneous catalysis, Journal of the American Chemical Society,142, pp. 13305-13309, 2020. [pdf]

10. B. Dong§, Y. Pei§, N. M. Mansour, M. Lu, K. Yang, W. Huang* and N. Fang*, Deciphering nanoconfinement effects on molecular orientation and reaction intermediate by single molecule imaging, Nature Communications, 10, pp. 4815-4820, 2019. [pdf]

9. Y. Wu§, M. R. K. Ali§, B. Dong, T. Han, K. Chen, J. Chen, Y. Tang, N. Fang*, F. Wang*, M. A. El-Sayed*, Gold nanorod photothermal therapy alters cell junctions and actin network in inhibiting cancer cell collective migration, ACS Nano, 9, pp. 9279-9290, 2018. [pdf]

8. B. Dong§, Y. Pei§, F. Zhao, T. Goh, Z. Qi, C. Xiao, K. Chen, W. Huang* and N. Fang*, In situ quantitative single-molecule study of dynamic catalytic processes in nanoconfinement, Nature Catalysis, 1, pp. 135-140, 2018. [pdf]

7. K. Chen§, Y. Gu§, W. Sun§, B. Dong, G. Wang, X. Fan, T. Xia and N. Fang* Characteristic rotational behaviors of rod-shaped cargo revealed by automated five-dimensional single particle tracking, Nature Communications, 8, pp. 887-897, 2017. [pdf]

6. F. Zhao, K. Chen, B. Dong, K. Yang, Y. Gu and N. Fang*, Localization accuracy of gold nanoparticles in single particle orientation and rotational tracking, Optical Express, 25, pp. 9860-9871, 2017. [pdf]

5. T. Chen, B. Dong, K. Chen, F. Zhao, X. Cheng, C. Ma, S. L, P. Zhang, S. Kang*, JW. Ha*, W. Xu* and N. Fang*, Optical super-resolution imaging of surface reactions, Chemical Reviews, 117, pp. 7510-7537, 2017. [pdf]

4. B. Dong§, X. Yang§, S. Zhu, DC. Bassham* and N. Fang*, Stochastic optical reconstruction microscopy imaging of microtubule arrays in intact arabidopsis thaliana seedling roots, Scientific Reports, 5, pp. 15694-15708, 2015. [pdf]

3. R. Han§, JW. Ha§, C. Xiao, Y. Pei, Z. Qi, B. Dong, NL. Bormann, W. Huang* and N. Fang*, Geometry-assisted three-dimensional superlocalization imaging of single-molecule catalysis on modular multilayer nanocatalysts, Angewandte Chemie International Edition, 53, pp. 13079-13083, 2014. [pdf]

2. JW. Ha§, TPA. Ruberu§, R. Han, B. Dong, J. Vela* and N. Fang*, Super-resolution mapping of photogenerated electron and hole separation in single metal–semiconductor nanocatalysts, Journal of the American Chemical Society, 136, pp. 1398-1408, 2014. [pdf]

1. Y. Gao, Y. Lin, B. Zhang, D Zou, M. He, B. Dong, W Hang* and B. Huang. Single-cell elemental analysis via high irradiance femtosecond laser ionization time-of-flight mass spectrometry, Analytical Chemistry, 85, pp. 4268-4272, 2013. [pdf]